BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H05LP1|AL425034
(174 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1588 101 3e-22
>3x_Contig1588
Length = 14692
Score = 101 bits (50), Expect = 3e-22
Identities = 106/124 (85%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 3 gtctcagccttagattactgaatsgatccaatcggcatagccgcagataaacaatcgata 62
|||||||||||||| |||| || ||||||||||||||||| ||||| |||||||||||
Sbjct: 1993 gtctcagccttagagtacttaa-gtatccaatcggcatagcctcagatgaacaatcgata 2051
Query: 63 ccaggaaggttaatgagactctccaacttcagccsscckckattgatcggaatgtgcaac 122
|||| || | |||||| |||||||||||||| || || | ||| |||| ||||||||||
Sbjct: 2052 ccagtaatg-taatgatactctccaacttcatccttccgcgatttatcgtaatgtgcaac 2110
Query: 123 gtgg 126
||||
Sbjct: 2111 gtgg 2114
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 539
Number of Sequences: 1807
Number of extensions: 539
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 174
length of database: 10,358,551
effective HSP length: 15
effective length of query: 159
effective length of database: 10,331,446
effective search space: 1642699914
effective search space used: 1642699914
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 48 (97.8 bits)